NeuroDebian

Estimated reading time: 3 minutes

NeuroDebian provides neuroscience research software for Debian, Ubuntu, and other derivatives.

GitHub repo: https://github.com/neurodebian/dockerfiles

Library reference

This content is imported from the official Docker Library docs, and is provided by the original uploader. You can view the Docker Store page for this repo at https://store.docker.com/images/neurodebian.

Supported tags and respective Dockerfile links

For detailed information about the published artifacts of each of the above supported tags (image metadata, transfer size, etc), please see the repos/neurodebian directory in the docker-library/repo-info GitHub repo.

For more information about this image and its history, please see the relevant manifest file (library/neurodebian). This image is updated via pull requests to the docker-library/official-images GitHub repo.

What is NeuroDebian?

NeuroDebian provides a large collection of popular neuroscience research software for the Debian operating system as well as Ubuntu and other derivatives. Popular packages includeAFNI, FSL, PyMVPA, and many others. While we do strive to maintain a high level of quality, we make no guarantee that a given package works as expected, so use them at your own risk.

neuro.debian.net

logo

About this image

NeuroDebian images only add NeuroDebian repository and repository’s GPG key. No apt indexes are downloaded, so apt-get update needs to be ran before any use of apt-get.

nd tags are used to reflect suffixes used in versions of packages available from NeuroDebian.

The neurodebian:latest tag will always point the Neurodebian-enabled latest stable release of Debian (which is, at the time of this writing, debian:wheezy).

sources.list

NeuroDebian APT file is installed under /etc/apt/sources.list.d/neurodebian.sources.list and currently enables only main (DFSG-compliant) area of the archive:

$ docker run neurodebian:latest cat /etc/apt/sources.list.d/neurodebian.sources.list
deb http://neuro.debian.net/debian wheezy main
deb http://neuro.debian.net/debian data main
#deb-src http://neuro.debian.net/debian-devel wheezy main

Supported Docker versions

This image is officially supported on Docker version 17.04.0-ce.

Support for older versions (down to 1.6) is provided on a best-effort basis.

Please see the Docker installation documentation for details on how to upgrade your Docker daemon.

User Feedback

Issues

If you have any problems with or questions about this image, please contact us through a GitHub issue. If the issue is related to a CVE, please check for a cve-tracker issue on the official-images repository first.

You can also reach many of the official image maintainers via the #docker-library IRC channel on Freenode.

Contributing

You are invited to contribute new features, fixes, or updates, large or small; we are always thrilled to receive pull requests, and do our best to process them as fast as we can.

Before you start to code, we recommend discussing your plans through a GitHub issue, especially for more ambitious contributions. This gives other contributors a chance to point you in the right direction, give you feedback on your design, and help you find out if someone else is working on the same thing.

Documentation

Documentation for this image is stored in the neurodebian/ directory of the docker-library/docs GitHub repo. Be sure to familiarize yourself with the repository’s README.md file before attempting a pull request.

library, sample, NeuroDebian